SE2030551

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5753
  • Medicago truncatula
  • SE2030551
  • hAT
  • Hat36
  • MtChr4:4347599-4348076
  • ATCACATC
  • TAGAGCTGTCAAAACGGGC

Secondary structure and sequence

TSD    TIR
5'



3' 
ATCACATC              C           CCCGTTTAGGCCCGGCCCGGCCGGGCCAAGGGCTTTTAAGGGCCGGGCTAAAAAGCCCGGTTTGAATATGGGCTGCAAAAAATGAGCCCGAGCCCGGCCCTATACGGGCTCCCGGGCTAACGGGCCGGCCCTGGCCCGTATTTTTTTCTTCCCTTTTCCATTCTTTTAAGTACGGAACATACATAAATATGTCGGGCTAACGGGC
        TAGAGCTGTCAAAA GGGCGGCCCGG                                                                                                                                                                                                             
        |||||||||||||| |||||||||||                                                                                                                                                                                                              
        ATCTCGACAGTTTT CCCGGCCCGGC                                                                                                                                                                                                             
CTACACTA              A           ATTCCCGGCCGGGCTTTCGGGCTTATTTTACATTCCGAACCCGGCTTATTCACCTCGGGCTTTAACTTCTCCCGAAAAATCGGGCCGGGCATTTTCGGGAACCGGGCAGGCCCGAGGCCCGACGGGCCTTCGGGCGTTTTTTATGTTGACAAAAAAAAAAAAAAACACCAGACACACACACTCTCTGACTATGCCCGGGCCCGAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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