SE2020561

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5763
  • Medicago truncatula
  • SE2020561
  • Mutator
  • M57
  • MtChr8:26334635-26334835
  • GACAAAACA
  • GGGTCAAGATCCTCTCCATTTATAACTTTTTCCATTTGTTGCAATTTGGAGAGAGATAGACACATATAAAATAATGATGGTGGGATCC

Secondary structure and sequence

TSD    TIR
5'



3' 
GACAAAACA    C                                                           TAT       T A       A   ACTTA
         GGGT AAGATCCTCTCCATTTATAACTTTTTCCATTTGTTGCAATTTGGAGAGAGATAGACACA   AAAATAA G TGGTGGG TCC     
         |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| | ||||||| |||     G
         CCCA TTCTAGGAGAGGTAAATATTGAAAAAGGTAAACAACGTTAAACTTCTCTCTATCTGTGT   TTTTATT C ACCACCC AGG     
ACAAAACAG    T                                                           -TT       - -       -   ATAGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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