SE2020581

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5783
  • Medicago truncatula
  • SE2020581
  • Mutator
  • M126
  • MtChr3:25850103-25850296
  • AATAAAATA
  • AGGGTGTTTCTAACTAGTGTCCTTAGGGCAATGGTTAAGGAATCTATAAATAA

Secondary structure and sequence

TSD    TIR
5'



3' 
   AATAAAAT       TTC         T     -              GA     T      -----------   -  T  TCTTAGAAATATAAGATGTTAAT
           AGGGTGT   TAACTAGTG CCTTA GGGCAATGGTTAAG  ATCTA AAATAA           AAA TT TA                       
           |||||||   ||||||||| ||||| ||||||||||||||  ||||| ||||||           ||| || ||                       T
           TCTTACA   ATTGATTAC GGAGT CCCGTTACCAATTT  TAGAT TTTATT           ACT TT TC                       
ATAAAATAACC       ---         -     T              -G     -      CATTCAAAAGT   T  -  TACCCATTAGCAATGAAATAGTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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