SE2020582

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5784
  • Medicago truncatula
  • SE2020582
  • Mutator
  • M66
  • MtChr3:31191092-31191353
  • TTTTATTTT
  • GGCTTAATTGCACTTTTGAACCCCTATCTTTTCAAAAGTTGTGGTTATGGACCCTTAACTAATTTAAATACAAATCAGCCCCCTA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTTATTTT                  A        C                                              T    C     -   TTTGATTCTTTGGTAGTTTTGGACCCCAAGGCA
         GGCTTAATTGCACTTTTG ACCCCTAT TTTTCAAAAGTTGTGGTTATGGACCCTTAACTAATTTAAATACAAA CAGC CCCTA TGT                                 
         |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||                                 A
         CCGAATTAACGTGAAAAC TGGGGATA AAAGGTTTTCAACGCCAATACCTGGGGATTGATTAAATTTATGTTT GTCG GGGAT CAC                                 
TTTTATTTT                  C        T                                              T    A     T   TCCACGGTGCACAGTTAAAAAAATAAAAAATAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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