SE2010583

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5785
  • Medicago truncatula
  • SE2010583
  • Tc1/Mariner
  • St33
  • MtChr1:11687088-11687238
  • TA
  • TACTTCCTCCGATCATTATTATAATTAAAAAATTACTTTTTAGATTCATTGAACGACTGATGTATGAGACC

Secondary structure and sequence

TSD    TIR
5'



3' 
           A            T          C                 C  C         A  C ATTA
TACTTCCTCCG TCATTATTATAA TAAAAAATTA TTTTTAGATTCATTGAA GA TGATGTATG GA C    
||||||||||| |||||||||||| |||||||||| ||||||||||||||||| || ||||||||| || |    A
ATGAAGGAGGC GGTAATAATGTT GTTTTTTAAT AAAAATTTAAGTAACTT TT ACTACATAT TT G    
           C            C          A                 A  T         A  A ATAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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