SE2020585

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5787
  • Medicago truncatula
  • SE2020585
  • Mutator
  • M8
  • MtChr8:19774172-19774464
  • AATTTAAAG
  • GGTTAATTAAGTTTTTAGTCCCT

Secondary structure and sequence

TSD    TIR
5'



3' 
AATTTAAAG                A      ATAAATATTC            A      C  C    TA        --------TT  -     TCTCTATGACATTTTTCTTAAGCATTTTAGAGACCAAAAATGTTGATGGAAATTTTTT
         GGTTAATTAAGTTTTT GTCCCT          GCAGTTTTGTTT TAGTTT TA AAAA  AAATCACA          TT TTTAG                                                          
         |||||||||||||||| ||||||          |||||||||||| |||||| || ||||  ||||||||          || |||||                                                          A
         CCAATTAATTCAAAAA CAGGGG          CGTTAAAACAAA ATCAAG AT TTTT  TTTAGTGT          GA TGTTT                                                          
AATTTAATA                C      ---------A            A      A  A    TA        CAAAAATCAG  A     TAAAAGACAATCACAAAAATCAGGAATATTTTAAAAGGCAGTCATAAAAATTAGGGAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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