SE2030587

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5789
  • Medicago truncatula
  • SE2030587
  • hAT
  • Hat10
  • MtChr8:5826726-5826898
  • TCACTCCC
  • CTATGAAGCACAGACAC

Secondary structure and sequence

TSD    TIR
5'



3' 
TCACTCCC           A     TCTTC  -  TAGGCGTGTCCCGGTGTCGGACACATGTACGACACCGACACTTGTAATTACACT
        CTATGAAGCAC GACAC     GG AT                                                      
        ||||||||||| |||||     || ||                                                      A
        GATACTTCGTG CTGTG     CC GT                                                      
CCCTCACT           C     -----  T  AGCCTGTGCTGTGACTGTGGCTGTATCGATTATTAAACTTTTTTAGTGTATTAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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