SE2020597

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5799
  • Medicago truncatula
  • SE2020597
  • Mutator
  • M57
  • MtChr7:17857228-17857438
  • CATTGCTAG
  • GCTAGGGGTCAATATCTTTTCCATTTATAAATTTCTCTATTTGTTCCATTTAGAGAGATAGAGA

Secondary structure and sequence

TSD    TIR
5'



3' 
CATT  -TA        T                     CTC        - C    --           G CACATAAAAAGT          TTAAT A       A   GCTTA
    GC   GGGGTCAA ATCTTTTCCATTTATAAATTT   TATTTGTT C ATTT  AGAGAGATAGA A            AAAAAAATAA     G TGGTGGG TTC     
    ||   |||||||| |||||||||||||||||||||   |||||||| | ||||  ||||||||||| |            ||||||||||     | ||||||| |||     G
    CG   CCCCAGTT TAGGAGAGGTAAATATTTAAA   ATAAACAA G TAAA  TCTCTCTATCT T            TTTTTTTGTT     C ACCACTC AGG     
 GAT  TTA        C                     AAA        C T    CC           G ------------          ----- -       -   ATAGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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