SE2020614

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5816
  • Medicago truncatula
  • SE2020614
  • Mutator
  • M11
  • MtChr1:6836094-6836285
  • TTAAATTAA
  • TAAATTAAGGGTCTTGTTAA

Secondary structure and sequence

TSD    TIR
5'



3' 
T   A       TCT      ---C     TCCTCGGGACACTCTTTAAGAATTTCAAAAGAAGAAATAATTTTATAAAAAAGTCAAATATTTCGAT
 TAA TTAAGGG   TGTTAA    GAGTG                                                                   
 ||| |||||||   ||||||    |||||                                                                   T
 ATT AATTCCC   ATAATT    ACGGA                                                                   
A   A       TTT      AGTA     GGCTCCGTGATCGATTCCGGAAATTTAACATTGAATAGTACTTTTCAACACACTAGTTACGTAGTCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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