SE2010623

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5825
  • Medicago truncatula
  • SE2010623
  • Tc1/Mariner
  • St1
  • MtChr6:21846621-21846771
  • TA
  • TACTCCCTCCGATCTTAAATGTAAGAAATTTTTCACTTTTTAGATTCATTTAATAAATGATGCATGTGGT

Secondary structure and sequence

TSD    TIR
5'



3' 
           A    A       G        CAC       A                  C  G    CCATA
TACTCCCTCCG TCTT AATGTAA AAATTTTT   TTTTTAG TTCATTTAATAAATGATG AT TGGT     
||||||||||| |||| ||||||| ||||||||   ||||||| |||||||||||||||||| || ||||     T
ATGAGGGAGGC AGAA TTACATT TTTGAAAA   AAAAATC AGGTAAGTTATTTACTAC TA ACCA     
           C    G       A        ATA       C                  A  A    AATAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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