Plant MITE

SE2010624

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_5826
Medicago truncatula
SE2010624
Tc1/Mariner
St10
MtChr4:1362196-1362346
TA
TACTCCCTCCAGTCTCAAATGTAAGCAACTTTTCACTTTTGAGGTTCATTCAATAAATAATGTATGTGGTCTATATTATGGACCACATTCATAATTTATTGAATGAACCTAAAAAGTGAAAAGTTGCTTACATTTGAGACCGGAGGGAGTA

Secondary structure and sequence

TSD TIR

5'

3'

          A                             G                 A   T           A
TACTCCCTCC GTCTCAAATGTAAGCAACTTTTCACTTTT AGGTTCATTCAATAAAT ATG ATGTGGTCTAT 
|||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| T
ATGAGGGAGG CAGAGTTTACATTCGTTGAAAAGTGAAAA TCCAAGTAAGTTATTTA TAC TACACCAGGTA 
          C                             A                 A   T           T

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2010624

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2010624