SE2020625

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5827
  • Medicago truncatula
  • SE2020625
  • Mutator
  • M4
  • AC235757:85987-86272
  • TAATTATAT
  • TAATTATATGGGTTAATGGTGTTTTACCCCCCTGTAATATAGGTCATTTTTGGTTTCCCCCCTGTAAAATAT

Secondary structure and sequence

TSD    TIR
5'



3' 
         TAT                                          - GT                  TTTTTTTGA     CCCCCTGTAAAATATTTTTTTTTTGGAATACCCCCCTAATAGGTCATAAAAAAACGAAAA
   TAATTA   GGGTTAATGGTGTTTTACCCCCCTGTAATATAGGTCATTTTT G  TTCCCCCCTGTAAAATAT         TTTAC                                                            
   ||||||   |||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||         |||||                                                            A
   ATTAAT   CCCAATTACCACGAAATGGGGGGACATTATATCCAGTAAAAA C  AAGGGGGGACATTTTATA         AAAAA                                                            
TAT      ---                                          A AA                  --------T     AAACCTTATGGGGGGATTATCCAGTATTTTTTTGCTGAAATAAAAAAAAAAACGTCTTAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3