SE2020636

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5838
  • Medicago truncatula
  • SE2020636
  • Mutator
  • M2
  • MtChr5:19069134-19069336
  • TAAAAAGAA
  • AGAGGTGTGTTATTTGAACAACCATTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TAAAAAGA     T   T      A          GATA        ATT       ------CAT     TACAAAGGAAAAGTAGGTTTTAGCACGAAAATCA
        AGAGG GTG TATTTG ACAACCATTT    GACAACTT   TGACAAC         AAATT                                  
        ||||| ||| |||||| ||||||||||    ||||||||   |||||||         |||||                                   
        TCTCT TAC ATAAAC TGTTGGTAAA    TTGTTGAA   ACTGTTG         GTATG                                  
AAGAAAAA     T   T      A          -ACA        AAC       AAAGAGAGA     AGTGTATACAAAAATGAAATAGAGAGATAACGAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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