SE2010648

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5850
  • Medicago truncatula
  • SE2010648
  • Tc1/Mariner
  • St25
  • MtChr1:26196422-26196697
  • TA
  • TACTCCCTC

Secondary structure and sequence

TSD    TIR
5'



3' 
         ---      TGTTATAAGAAGAAAAACCAAAAAACATCAAAACCAATGCTATCATTAATTGTCGTAACTTTTTAAACATTTTTACAAATATACCCTTATAGAATGTTGTGAAACATTAAATACATCCACT
TACTCCCTC   GGTCCT                                                                                                                         
|||||||||   ||||||                                                                                                                         A
ATGAGGGAG   AGGAAT                                                                                                                         
         GCT      TACATTCTTTTTAAAGTTTTTTTTTAAACCAGGATAAATATTCTTTTACAGTGTTAAAAACTTCATATTAATAACAAATTTTATGAAAAATAGGGAGTAAATTCCTAACGGAAAAATTATA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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