SE2020652

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5854
  • Medicago truncatula
  • SE2020652
  • Mutator
  • M133
  • MtChr8:31416955-31417090
  • AGAATAATA
  • GGGTTAATGGTGTTTTACCCCTGTAATATATGTTATTTTTTGTTTTCCTTCCTGTAAATATTTTACAGGAGGGAAAACCAAAAATAACCTATATTACAGGGGTAAACACCATTAACCC

Secondary structure and sequence

TSD    TIR
5'



3' 
AGAATAATA               T              T         T                 T
         GGGTTAATGGTGTTT ACCCCTGTAATATA GTTATTTTT GTTTTCCTTCCTGTAAA 
         ||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||| A
         CCCAATTACCACAAA TGGGGACATTATAT CAATAAAAA CAAAAGGGAGGACATTT 
ATAATAAGA               -              C         C                 T
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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