SE2020661

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5863
  • Medicago truncatula
  • SE2020661
  • Mutator
  • M57
  • MtChr8:30029374-30029574
  • GTCTCCCAT
  • ATGGGTAAAGATCCTCTCCATTTATAACTTCTTCCATTTGTTGCAATTTGGAGAGAGATAGACA

Secondary structure and sequence

TSD    TIR
5'



3' 
GTCTCCC      A                       C                                 -AAAA       --        -   TATCA
       ATGGGT AAGATCCTCTCCATTTATAACTT TTCCATTTGTTGCAATTTGGAGAGAGATAGACA     AAAATAA  GTGGTGGG TCC     
       |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||     |||||||  |||||||| |||     C
       TGCCCA TTCTAGGAGAGGTAAATATTGAA AAGGTAAACAACGTTAAACCTCTCTCTATCTGT     TTTTATT  TACCACCC AGG     
TACCCTC      G                       A                                 GTCTC       AC        T   TGAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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