SE2020682

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5884
  • Medicago truncatula
  • SE2020682
  • Mutator
  • M2
  • MtChr6:18531327-18531523
  • AAAAAAAGA
  • AAGAGTAGTGTTATTTGAACAAGCA

Secondary structure and sequence

TSD    TIR
5'



3' 
AAAAA     T    T      A    G  -AATGA        ATG         C           TTTTCATTGGTCAAAAACAATGGAGAGGGAA
     AAGAG AGTG TATTTG ACAA CA      GACAATTT   TGACAACTT TTTTTTCTCTC                               
     ||||| |||| |||||| |||| ||      ||||||||   ||||||||| |||||||||||                               A
     TTCTC TTAC ATAAAC TGTT GT      CTGTTGAA   ACTGTTGAA GAGAGAGTATG                               
AAAAA     T    T      A    G  GAAAGA        -AA         A           AGTGTAATATGAGAATAAGAGAGTGAAAGAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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