SE2020695

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5897
  • Medicago truncatula
  • SE2020695
  • Mutator
  • M137
  • MtChr6:18662704-18662899
  • AAACAAACA
  • GAAAAATGTTGTATACATATGGTGTTTTTGACTGAAAAACACCGGTAA

Secondary structure and sequence

TSD    TIR
5'



3' 
AAACAAACA        T      C          TT  A           C     TTTATTAATATAACTC                   A   ATTT
         GAAAAATG TGTATA ATATGGTGTT  TG CTGAAAAACAC GGTAA                CATCGGCAGTTAACTGCCG TGA    
         |||||||| |||||| ||||||||||  || ||||||||||| |||||                ||||||||||||||||||| |||     
         CTTTTTAT ACATAT TATATCACAA  AC GACTTTTTGTG TCATT                GTAGCCGTTAATTGATGGC ACT    
ACAAACAAA        T      A          --  C           T     --CTCTGCTTTTACGT                   A   AATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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