SE2010699

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5901
  • Medicago truncatula
  • SE2010699
  • Tc1/Mariner
  • St4
  • MtChr2:31063698-31063846
  • TA
  • TACTCCCTCCGTTTTTAAATATAAGCAAATTTTACTTTTTAGGTTGATTCAATTATTGATGTATGTAGT

Secondary structure and sequence

TSD    TIR
5'



3' 
                         C                   G         T          A  CCATA
TACTCCCTCCGTTTTTAAATATAAG AAATTTTACTTTTTAGGTT ATTCAATTA TGATGTATGT GT     
||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||| ||     T
ATGAGGGAGGCAAAGATTTATATTC TTTAAAATGAAAAATCCAA TAAGTTAAT ATTACATACA CA     
                         A                   G         T          C  AATAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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