SE2010709

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5911
  • Medicago truncatula
  • SE2010709
  • Tc1/Mariner
  • St24
  • AC233657:123724-124009
  • TA
  • TACTCCCTCCGTCCCAAATTGTATGTC

Secondary structure and sequence

TSD    TIR
5'



3' 
                         T -------ACTTTA           TGTCCCAA TTGTATGTCACTTTAGAATACCAATGAAATATTAATGTTATTTTTCCTATTATATCCTTAACTATTTATTACTCTTTCTTTTTTCAATTC
TACTCCCTCCGTCCCAAATTGTATG C             GAAAAAATATT        A                                                                                          
||||||||||||||||||||||||| |             |||||||||||        |                                                                                          T
ATGAGGGAGGCAGGGTTTAACATAC G             GTGTGTATAAT        T                                                                                          
                         T CAAAACCCGTAAA           -------- CTTTACATTAATTATAACACACCCTTTCTCTATAATACTCAACAAAATTGTTTTAATAGGAATTATTTACTATACCCTTTCTATTTACTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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