SE2020710

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5912
  • Medicago truncatula
  • SE2020710
  • Mutator
  • M81
  • MtChr8:35133351-35133579
  • GTGTTACTA
  • GTGTTACTAGAGCAATGTTATATCTCTAGAAAAATAACTTTAAAAAAATTTCAAGA

Secondary structure and sequence

TSD    TIR
5'



3' 
     T   TA   C        A              A T    A  AA        ---ATAAA    GCCATTTTTCAGCCAATCACAATGCACTATTTGCCACAATTTAAGGGG
  GTG TAC  GAG AATGTTAT TCTCTAGAAAAATA C TTAA AA  TTTCAAGA        ACTT                                                
  ||| |||  ||| |||||||| |||||||||||||| | |||| ||  ||||||||        ||||                                                 
  CAT GTG  CTT TTACAATA AGAGATCTTTTTAT G AGTT TT  AAAGTTCT        CGTT                                                
AT   T   -C   -        A              C T    C  AA        GTATCAAC    CAAAATTAACGTACTAAATAAACAAGTGAAGGATAAAAAGTCGGTGTG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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