SE2020712

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5914
  • Medicago truncatula
  • SE2020712
  • Mutator
  • M142
  • MtChr7:14263745-14264126
  • TTGAAATTT
  • GGGTTA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTGAAATTTG      ------------------------   ATT   AAATGTGTACCGAGTAATTATAATAATTCTTTATTGAAATTTTAAAATAGTCTCTGATTATGCATTTTGTTAGTCTAAATAATTTATAACATATAAAATATTTCATTCATATTTTCATATTAATCCATCGATATACTTACTTATTGTCCTATCAA
          GGGTTA                        TCG   CAC                                                                                                                                                           
          ||||||                        |||   |||                                                                                                                                                            
          CCCAAT                        CAT   GGT                                                                                                                                                           
TTTAAAGTTG      TATTAATATAACCAGAGATCTAGA   --C   ATTATCAGGAAGTTCCATAGCTTTAAAATTTTATCAATAACTAACACCTGAAGCAATTAGTTTTATCAAAAAAATACAATTTTATCAGAGAGTTACCACTGTAATTGAGAAAAGTATTTCCTGTACCATACTGTCATTGATTCATGAATATCACC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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