SE2020716

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5918
  • Medicago truncatula
  • SE2020716
  • Mutator
  • M37
  • MtChr5:1689192-1689389
  • TTTTTAAGG
  • AAGGGTCTTGTTTACCAATGCCCTTAGGGCACTAGTTAAGGA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTTT     TCT    T  CAA  C    A  -     A        ------   AAATATAGAAATAATTTACAAGTTTTATGTAGATAAAGTTACTTTT
     AAGGG   TGTT AC   TG CCTT GG GCACT GTTAAGGA      TTC                                              
     |||||   |||| ||   || |||| || ||||| ||||||||      |||                                               
     TTTCC   ACAA TG   AC GGAA CC CGTGA CAATTCTT      TTT                                              
TTTTT     TTT    T  TTC  A    -  G     A        CAAATT   TATTTAAAATAGAACCTTTACTACATAAGTTGTGTAACTTTCAAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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