SE2010722

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5924
  • Medicago truncatula
  • SE2010722
  • Tc1/Mariner
  • St1
  • MtChr7:24906771-24906920
  • TA
  • TACTCCCTCCGGTCACATTTATAAGCAAAAAATCACTTTTTTGATTCATTCAATATTTAATGTATTTGGTC

Secondary structure and sequence

TSD    TIR
5'



3' 
                               AT        T A      C     T              AATA
TACTCCCTCCGGTCACATTTATAAGCAAAAA  CACTTTTT G TTCATT AATAT TAATGTATTTGGTC    
|||||||||||||||||||||||||||||||  |||||||| | |||||| ||||| ||||||||||||||     
ATGAGGGAGGCCAGTGTAAATATTCGTTTTT  GTGAAAAA C AAGTAA TTATG ATTACATAAACCAG    
                               AC        T C      C     T              ATAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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