SE2020726

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5928
  • Medicago truncatula
  • SE2020726
  • Mutator
  • M16
  • MtChr2:30905898-30906100
  • TTTGTTTTA
  • AGGGTAGTGTTAACTTGTGCTCTTAGGGCACATGTTAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTGTTTT    T                           T     GAAACC    AGA    A  TTCTCTAAAATTT        -  ---AT  A    AA
        AGGG AGTGTTAACTTGTGCTCTTAGGGCACA GTTAA      CAAA   AGAA TA             TGTGCATT CA     TC TTAA  
        |||| ||||||||||||||||||||||||||| |||||      ||||   |||| ||             |||||||| ||     || ||||   
        TCCC TTACAATTGAACACGGGAATTCCGTGT CAATT      GTTT   TCTT AT             ACACGTAA GT     AG AATT  
ATTTTGTT    T                           T     -ACTAA    ATA    A  TAAATAACCTTAC        C  AAATT  A    GA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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