SE2010728

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5930
  • Medicago truncatula
  • SE2010728
  • Tc1/Mariner
  • St4
  • MtChr3:11096377-11096527
  • TA
  • TACACCCTCCGGTCACTATTATAAGCAAAAATTTATATTTTAGATTCATTCAATTAATGATGTATATGGT

Secondary structure and sequence

TSD    TIR
5'



3' 
                                 T                  ATT          A    CTTTA
TACACCCTCCGGTCACTATTATAAGCAAAAATT ATATTTTAGATTCATTCA   AATGATGTAT TGGT     
||||||||||||||||||||||||||||||||| ||||||||||||||||||   |||||||||| ||||     T
ATGTGGGAGGTCAGTGATAATATTCGTTTTTAG TATAAAATTTAAGTAAGT   TTACTACATA ACTA     
                                 T                  AAT          C    AATAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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