Plant MITE

SE2010742

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_5944
Medicago truncatula
SE2010742
Tc1/Mariner
St4
MtChr7:26439629-26439777
TA
TACTCCCTCCGTCTCAAAATATAAGCAAATTTTACTTTTTAGGTTCATTCAATTAATGATGTATGTGGTCTATATTATGGACCACATACATCATTAATTGAATGAACCTAAAAAGTAAAATTTGCTTATATTTTAAAACGGAGGGAGTA

Secondary structure and sequence

TSD TIR

5'

3'

            CTC                                                          A
TACTCCCTCCGT   AAAATATAAGCAAATTTTACTTTTTAGGTTCATTCAATTAATGATGTATGTGGTCTAT 
||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| T
ATGAGGGAGGCA   TTTTATATTCGTTTAAAATGAAAAATCCAAGTAAGTTAATTACTACATACACCAGGTA 
            AAA                                                          T

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2010742

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2010742