SE2020748

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5950
  • Medicago truncatula
  • SE2020748
  • Mutator
  • M42
  • MtChr6:5118898-5119101
  • TTTTTTTAA
  • AAGGGAAATGCTAACTTTTGCCCTTAAGGCACAAGTTAATGAGTCAAAAGTAGAAATATTGTGTTGTAATCAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTTTTT     AA          T      TAA      A     -T  G                ------------     -----TG       TGCATTT   TTT
       AAGGG  ATGCTAACTT TGCCCT   GGCACA GTTAA  GA TCAAAAGTAGAAATAT            TGTGT       TAATCAA       GAA   
       |||||  |||||||||| ||||||   |||||| |||||  || ||||||||||||||||            |||||       |||||||       |||    
       TTCCC  TACGATTGAA ACGGGA   CCGTGT CAATT  TT GGTTTTCATCTTTGTA            ACACG       ATTAGTT       TTT   
AATTTTT     AG          C      TTC      A     CT  G                CAAGAATTTAAA     TAAGTTA       TTTATTT   TCA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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