SE2020757

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5959
  • Medicago truncatula
  • SE2020757
  • Mutator
  • M2
  • AC234702:16121-16322
  • TTTGTTTAA
  • AAGAGCAATGATATTTGAACAACCATTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTGTTT     C           A          GCTA        CAT      ----------   A TTTTCTCTCTTTTCATTGGTTAAAAACAATGGAGAG
       AAGAG AATGATATTTG ACAACCATTT    ACAACTTT   GACAAC          CTC T                                    
       ||||| ||||||||||| ||||||||||    ||||||||   ||||||          ||| |                                     
       TTCTC TTACTATAAAC TGTTGGTAAA    TGTTGAAA   TTGTTG          TAT G                                    
AATTTGT     T           A          AAAC        -AT      AAATAGAGAG   - AGTGTAATATAAGAATAAAAGAGAGAAGGAAAAAGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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