SE2020758

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5960
  • Medicago truncatula
  • SE2020758
  • Mutator
  • M91
  • AC225518:63099-63289
  • TTTAGATAT
  • TTTAGATATGAGTAATGATATTTGAACAATTTTTTTGCTATAATTTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
         TAT   T           A      -      C          ------------------------------------------G G     CTTGTTGTGCTCTCTTTTC
   TTTAGA   GAG AATGATATTTG ACAATT TTTTTG TATAATTTTT                                           G ACAAC                   
   ||||||   ||| ||||||||||| |||||| |||||| ||||||||||                                           | |||||                    
   AGATTT   CTC TTACTATAAAC TGTTAG AAAAAC ATGTTGAAAG                                           A GAGAG                   
TAT      ---   T           A      T      -          AGAGAGTATGAGTGTAATAGAAGAATAAGAGAGAGAAGGAAAA -     AGGTAACAAAAACTGGTTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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