SE2020759

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5961
  • Medicago truncatula
  • SE2020759
  • Mutator
  • M12
  • MtChr2:20758057-20758321
  • TTCACTCAT
  • GGGTGCGGTTATGGTGCATAAGGAAATCCTTATGCACCCTGCATAAATCCAGAAATGGTTTTGAAGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTCACTCAT    -                               ---             C             --GA   ACAACTCACA          CCACAGCAAAATGGTTTTGGCATAATTGGACTGTGATT
         GGGT GCGGTTATGGTGCATAAGGAAATCCTTATGC   ACCCTGCATAAAT CAGAAATGGTTTT    AGT          GAAACCATTT                                      
         |||| |||||||||||||||||||||||||||||||   ||||||||||||| |||||||||||||    |||          ||||||||||                                      T
         TCCA CGCCAATACCACGTATTCCTTTAGGAATACG   TGGGACGTATTTA GTCTTTACCAAAG    TCA          CATGATTTTT                                      
 CACTCACT    A                               TGG             A             ACAC   ---------A          TGGTAATCTACATGAATTACCAAAGATCGTGAGACGTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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