SE2010760

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5962
  • Medicago truncatula
  • SE2010760
  • Tc1/Mariner
  • St10
  • MtChr2:27287540-27287690
  • TA
  • TACTCCCTCCGGTCACATTTATAAGCAAAAAATAACTTTTTAAGTACATTGAATAATTAATGTATCCGATCACA

Secondary structure and sequence

TSD    TIR
5'



3' 
                               A          A       G  T            C    A  TT
TACTCCCTCCGGTCACATTTATAAGCAAAAA TAACTTTTTA GTACATT AA AATTAATGTATC GATC CA  
||||||||||||||||||||||||||||||| |||||||||| ||||||| || |||||||||||| |||| ||   
ATGAGGGAGGCCAGTGTAAATATTCGTTTTT GTTGAAAAAT CATGTAG TT TTAATTACATAG TTGG GT  
                               G          C       G  C            A    -  AT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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