SE2020765

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5967
  • Medicago truncatula
  • SE2020765
  • Mutator
  • M146
  • MtChr5:23964869-23965056
  • TTATTTAAA
  • AAGGTTTTGTTAACGAGTGTCCTAAGGGTA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTATTTAA    -TTT                A      ------CTC    ATTCCTAATAAAGAAATTATTTTTTAAAAAGTCAAAAACTCCAATT
        AAGG    TGTTAACGAGTGTCCT AGGGTA         TTAG                                              
        ||||    |||||||||||||||| ||||||         ||||                                               
        TTCC    ACAATTGTTTACGGGA TCCCGT         TTGA                                              
 AAATTTA    CTTT                A      AACAAATCA    AATTTATCATTCAAAAACAGTTTCAAATACTTTAGTTACGTAACCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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