SE2010777

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5979
  • Medicago truncatula
  • SE2010777
  • Tc1/Mariner
  • St15
  • MtChr6:6180783-6180911
  • TA
  • TACTCCCTCTGTCCCAAAATGTAAGCAAAAATAGGTCAACATAAGTTGATGTATCTGGTACAAATTTTGAACAAAATACATTAACTTTTGTTGACCAATTTTTGCTTACATTTTGGGTCAGAGGGAGTA

Secondary structure and sequence

TSD    TIR
5'



3' 
           T                    A        T            CTG  A   A
TACTCCCTCTG CCCAAAATGTAAGCAAAAAT GGTCAACA AAGTTGATGTAT   GT CAA 
||||||||||| |||||||||||||||||||| |||||||| ||||||||||||   || ||| T
ATGAGGGAGAC GGGTTTTACATTCGTTTTTA CCAGTTGT TTCAATTACATA   CA GTT 
           T                    A        T            AAA  A   T
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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