SE2010787

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5989
  • Medicago truncatula
  • SE2010787
  • Tc1/Mariner
  • St1
  • MtChr5:7175771-7175920
  • TA
  • TACTCCCTCCGGTCACTATTATAAGCAAAAGTTGACTTTTTAGGTTCAATCAATAAATGATGTATGTGGTCTA

Secondary structure and sequence

TSD    TIR
5'



3' 
         C       A       C       G              A                        TA
TACTCCCTC GGTCACT TTATAAG AAAAGTT ACTTTTTAGGTTCA TCAATAAATGATGTATGTGGTCTA  
||||||||| ||||||| ||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||   
ATGAGGGAG CCAGTGA AATATTC TTTTCAA TGAAAAATTTAAGT AGTTATTTACTATATACATCAGAT  
         A       A       A       G              A                        AT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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