SE2030791

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5993
  • Medicago truncatula
  • SE2030791
  • hAT
  • Hat10
  • MtChr8:27677680-27677876
  • ATGGTAGA
  • CTATGAAGCACAG

Secondary structure and sequence

TSD    TIR
5'



3' 
ATGGTAGA             ATACG    -  GAACACGACACAAATATTGACACGTCGACATAGCTAATAATTTGTAAAAATCACATAATTCTGTGTAA
        CTATGAAGCACAG     GACA TT                                                                    
        |||||||||||||     |||| ||                                                                    T
        GATACTTCGTGTC     TGCG GA                                                                    
AGATGGTA             -----    A  AGCCTAATCCGCACAGGACCACAGTCTGTACACAGCATAGACTGTGGTTGTACTGTAGCTGTAAACAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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