SE2020797

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5999
  • Medicago truncatula
  • SE2020797
  • Mutator
  • M18
  • MtChr5:41765292-41765499
  • TTATTAATT
  • ATTAATTGAGGAATGCTAGCAACACTCTCTTTTGAGCACTCTCTCTAGCACTCACTCTTTTATTAGGTGAAATCAATGTATGTCCCACCACTTTATGTGGGTTCCAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT      -T                             C                           A               T T  CAC      --AT    G
  ATTAAT  GAGGAATGCTAGCAACACTCTCTTTTGAG ACTCTCTCTAGCACTCACTCTTTTATT GGTGAAATCAATGTA G CC   CACTTT    GTGG 
  ||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| | ||   ||||||    |||| T
  TAATTA  CTCCTTACGATCGTTGTGAGAGAAAACTC TGAGAGAGGTCGTGAGTGAGAAAATAA CCACTTTAGTTACAT C GG   GTGAAA    TACC 
 T      TT                             T                           C               C T  -AT      CCTT    T
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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