SE2020816

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6018
  • Medicago truncatula
  • SE2020816
  • Mutator
  • M24
  • MtChr7:8198671-8198974
  • TAGAAATTA
  • TAGGGTTAATAGTGTTTTTCACCCCTGTAATATATGTCATTTTCCGTTTTCGCCCCTATAAAATTTTTGGTTTGATTTGCACCCTCGTAAAATTTTTATTTTCTGGAAAACACCCCTAATAGGCCATTTTCAGAATTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TAGAAAT                      C              C      C                                                                      C             -----         TTTT
       TAGGGTTAATAGTGTTTTTCAC CCTGTAATATATGT ATTTTC GTTTTCGCCCCTATAAAATTTTTGGTTTGATTTGCACCCTCGTAAAATTTTTATTTTCTGGAAAACACCC TAATAGGCCATTT     TCAGAATTT    
       |||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||     |||||||||    T
       ATCCCAATTATCACAAAAAGTG GGACATTATATACA TAAAGG CAAAAGCGGGGATATTTTAAAAGTCAAATTAAACGTGGGAGTATTTTAAAAATAAAAGGCCTTTTGTGGG ATTATCTGGTAAG     GGTTTTAAA    
ATTAAAG                      A              A      C                                                                      A             TTTTT         TAAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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