SE2020827

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6029
  • Medicago truncatula
  • SE2020827
  • Mutator
  • M89
  • AC146568:14781-14977
  • CATGAGGTG
  • CATGAGGTGGGATAGCACTTGTGTACCATAATGGTATATACCATTGTCCAATTAGAATGTGCTATGTGGCA

Secondary structure and sequence

TSD    TIR
5'



3' 
   GAG        G           ---------CA                  TC        A        G  G  --CACC     AAAATATATATCA
CAT   GTGGGATA CACTTGTGTAC           TAATGGTATATACCATTG  CAATTAGA TGTGCTAT TG CA      CTTTA             
|||   |||||||| |||||||||||           ||||||||||||||||||  |||||||| |||||||| || ||      |||||              
GTG   TACCCTAT GTGAACACATG           GTTACCATATATGGTAGC  GTTAATCT ACACGGTA AT GT      GAAAT             
   GAG        G           ATAATTCCATC                  CA        C        G  G  TACAAT     ATCTACGAAATAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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