SE2020829

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6031
  • Medicago truncatula
  • SE2020829
  • Mutator
  • M2
  • MtChr4:19172662-19172864
  • TATTTAAAA
  • TTTAAAAGAGAAATGATATTTGTACAATCA

Secondary structure and sequence

TSD    TIR
5'



3' 
TA      -      A           CAA   TTAT           T -         CTCTCTCATACTCACATT   TTCTTATTCTCTCTCTTTCTTTTTCTCTCT
  TTTAAA AGAGAA TGATATTTGTA   TCA    GTGACAATTTT G GACAACTTT                  AGA                              
  |||||| |||||| |||||||||||   |||    ||||||||||| | |||||||||                  |||                              C
  AAATTT TCTCTT ACTATAAACAT   GGT    TACTGTTGAAA C CTGTTGGAA                  AAA                              
 A      A      C           ATA   TAAC           C A         -----------------T   AAGAGAGTAAGAATAACTAGTTTTTGTTAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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