SE2050839

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6041
  • Medicago truncatula
  • SE2050839
  • PIF/harbinger
  • To3
  • MtChr7:15728563-15728776
  • TAA
  • AGAGTGTGTTTGGATGAGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TA                A  ---------------------------TAA        TTTTAAAGAATTTAAAATTCTAGGCAATTATCTCAAAGTATTTGAATTCCCTCATAACATT
  AGAGTGTGTTTGGATG GG                              TTTGGAAA                                                             
  |||||||||||||||| ||                              ||||||||                                                             A
  TCTCACACAAACCTAC CC                              CCTTAAGT                                                             
AA                C  CTTACAAAACTCCCTTACATTACAATACTC        TTATGAAACTCCACTTAAGGTAACAAACCTACCCCCTTACATTACATTACAATTCCTTTAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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