SE2050843

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6045
  • Medicago truncatula
  • SE2050843
  • PIF/harbinger
  • To3
  • MtChr2:963390-963553
  • TAA
  • AGAGTGTGTTTGGATGGAAAAATGTTTTGAGGGAATGTAATGTTTTGAAGGAATTTAACTACTTTGAGTTGAATTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TA                 AAA          G                 A                   T       AAAC
  AGAGTGTGTTTGGATGG   AATGTTTTGA GGAATGTAATGTTTTGA GGAATTTAACTACTTTGAG TGAATTC    
  |||||||||||||||||   |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||     
  TCTCACACAAACCTACC   TTATAAAACT CCTTACATTACAAAACT CCTTAAGTTGATGAAATTC ACTTAAG    
AA                 CCC          A                 C                   C       ATAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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