SE2020855

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6057
  • Medicago truncatula
  • SE2020855
  • Mutator
  • M23
  • CU571152:117819-117995
  • CTTCTTATG
  • GGGGTAGCACTTGGGTGACATAGAGTTGGGTGACATTGGTGACATTGGCCAATCACAATGTCCCAATGCTTGTG

Secondary structure and sequence

TSD    TIR
5'



3' 
CTTCTTAT    T  C                                                      C           AAAGAG
        GGGG AG ACTTGGGTGACATAGAGTTGGGTGACATTGGTGACATTGGCCAATCACAATGTC CAATGCTTGTG      
        |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      A
        CCCT TT TGAACCCACTGTATCTCAACCCACTGTAACCACTGTAACTGGTTAGTGTTACGG GTTACGAATAC      
GTATTCTT    T  A                                                      T           AAAGAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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