SE2010862

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6064
  • Medicago truncatula
  • SE2010862
  • Tc1/Mariner
  • St3
  • MtChr1:4954509-4954796
  • TA
  • TACTCCCTCCGTCCCTTAATGTAGGCACCCATT

Secondary structure and sequence

TSD    TIR
5'



3' 
                TA  G            ------------G    TTTCACATTTTTTAAGAAAAGTTGTCAGTGTAATTAATGTGTCTGTTTTGTGTGTTAATATTACGAAATTGTCTTTTGTTTGTATGTGTATTAAATTTGA
TACTCCCTCCGTCCCT  AT TAGGCACCCATT             CCTT                                                                                                    
||||||||||||||||  || ||||||||||||             ||||                                                                                                     
ATGAGGGAGGCAGGGA  TA ATTCGTGGGTAA             CAGG                                                                                                    
                TA  G            ACTAAAATAAAAA    GATTTACATTTGGGGAAAAGTTTAATGATCTACGTAAATAATAAAAAAAGGATTTGTATGGGGATTAATTATGATGATAGAAGAGAACTTTATACTTTTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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