SE2030874

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6076
  • Medicago truncatula
  • SE2030874
  • hAT
  • Hat45
  • AC233100:46537-47079
  • CATCTCCA
  • A

Secondary structure and sequence

TSD    TIR
5'



3' 
CATCTCCAC     CGGCCTTGAGGGTGTGCAAGGTGCTCAACCAGGCCGGGCCTCTAAATGCTACGGACCTCTAACGAAAAATTAAATTTAATACCCAGCCCCCACTTAAATAAATAAAAAATATATGTTATATCATTTTCTTTCTTTAGTACACGTTTGAGTTTTTTTTCTAGATTCTAGTTCTCCTTTTGTACGTAAATCGGATCCTATCAAACCACCCATAATTTGTATAATCACTTAATCAGTCAATTTGAAAAGCTATTTCATTGC
         AGGCC                                                                                                                                                                                                                                                                  
         |||||                                                                                                                                                                                                                                                                   
         GTCCC                                                                                                                                                                                                                                                                  
 ACCTCTAC     GGCAGGGACACTTTATCCTCCAAGCCAAGAGAAAAGTTTTATCCAGGAATCATTTTATTTTACGTTAAAAAACACATCAATTTAAAGTAATTTTTTTTGTCTTAGTATTCTTGAAGATTTGTAATTTCTTTAATTTTTTTTAATTCACTTTCTCCATTTTAAATGGATTGCCACAGCAAACCTAAACAGTGAGGAAACAACACCTTTTCCCATTTTGCTTATCAAATACGCTTCTTTTTTTATTAACAACACTAAGAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3