SE2020879

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6081
  • Medicago truncatula
  • SE2020879
  • Mutator
  • M66
  • MtChr1:19089067-19089329
  • TAACATGAA
  • CATGAAGGCTTAATTGCACTTTTGGCCCCCTATCTTTCCAAAAGTTGCGATTTTGGCCCCGTAATTAATTAAAATACAAAACAGCCCCCTATGTATTGGATCTTTGGCAGTTTTGGCCCCCAAGA

Secondary structure and sequence

TSD    TIR
5'



3' 
TAA    -A                            C   C                    -  G                                                         ---CC     CC
   CATG  AGGCTTAATTGCACTTTTGGCCCCCTAT TTT CAAAAGTTGCGATTTTGGCC CC TAATTAATTAAAATACAAAACAGCCCCCTATGTATTGGATCTTTGGCAGTTTTGGCC     CAAGA  
   ||||  |||||||||||||||||||||||||||| ||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||||   
   GTAC  TCCGAATTAACGTGAAAACCGGGGGATA AAA GTTTTCAACGCTAAAACCGG GG ATTGATTAATTTTATGTTTTGTCGGGGGATACATAACCTAGAAACCGTCAAAACCGG     GTTTT  
 AA    AA                            A   A                    A  -                                                         ATTCA     CA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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