SE2050883

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6085
  • Medicago truncatula
  • SE2050883
  • PIF/harbinger
  • To8
  • MtChr2:7967886-7968173
  • TAT
  • TATGGCTCTGTTTGGAT

Secondary structure and sequence

TSD    TIR
5'



3' 
       T          AAACA         C       GAG   A    --------------------------------         TAAACACTTATGTATAAGCTATTTCTATAGCACAAGAAAAAAATATAGTTAAATAGCTTTCATATTTACTA
 TATGGC CTGTTTGGAT     ACTTATTTG AGCTTAT   ATT GCAT                                TTATCATGA                                                                       
 |||||| ||||||||||     ||||||||| |||||||   ||| ||||                                |||||||||                                                                       T
 ATACCG GATAAACCTA     TGAATAAAC TCGAATA   TAA CGTA                                TTTTGTTGA                                                                       
T      -          ---AA         -       -GA   C    TTCAATACACTCTGACAAACTCCCCCGAACAA         ATACTGTAACAAGTATTCGATAAAAGTCGAATAAAAGTATTCGAGACATTCTATCGAATACTTTTGTCGAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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