SE2020897

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6099
  • Medicago truncatula
  • SE2020897
  • Mutator
  • M81
  • MtChr3:2619458-2619676
  • ATTATATTA
  • TATATTAGAGCAATGCTATATATCTAGATAAATAACATCAAGAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
 AT    TTA   C        A              A          -------    CAAGAATAAAGAGCAGCCAATCACAATGCACTATTTGCCACAATTCAAGGAGGTG
   TATA   GAG AATGCTAT TATCTAGATAAATA CATCAAGAAT       TCTT                                                       
   ||||   ||| |||||||| |||||||||||||| ||||||||||       ||||                                                        
   ATAT   CTT TTACGATA ATAGATCTGTTTAT GTAGTTCTTA       CTGT                                                       
ATT    TAC   -        A              A          AAAAATT    GTCAACAGTTCAAAATTAACGTACTAAATAAACAAGTGAAGGATAAAAAGTCGGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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