SE2020910

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6112
  • Medicago truncatula
  • SE2020910
  • Mutator
  • M16
  • MtChr2:22721145-22721347
  • TATACTAAA
  • AGGGAAATGTTAACTTGTGCCCTTAAGGCACAAGTTTATAAGCCAAATGTAGAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TATACTAA    AAA                  A      A  TTA    CC    G      TAAT    TGGAATGCGTGCATTAAATTTAATCTTTAATGTTT
        AGGG   TGTTAACTTGTGCCCTTA GGCACA GT   TAAG  AAAT TAGAAA    GTAT                                   
        ||||   |||||||||||||||||| |||||| ||   ||||  |||| ||||||    ||||                                    
        TCCC   ACAATTGAATACGGGAAT CCGTGT CA   ATTC  TTTA GTCTTT    TTCC                                   
AAATCATA    ATC                  C      A  ---    --    G      ----    TTATAAAGGAATTTGAAACACGTAAGTTAAGTAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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