SE2020911

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6113
  • Medicago truncatula
  • SE2020911
  • Mutator
  • M31
  • MtChr5:930982-931290
  • TAAAGTTTA
  • TAAAGTTTAGGCTAAAATATGGTTTTGGTCCCTGCAAATATGCCTCGTTTTGATTTTAGTCCCTGTAAAAAAAAATTGTTGTTTTTGGTCCCT

Secondary structure and sequence

TSD    TIR
5'



3' 
    G                                               A                     A                     AAATCAAAAGATTTTGCAGGGACTATTTCTCTAATAAATGGGTTCAATCATCATGTGC
TAAA TTTAGGCTAAAATATGGTTTTGGTCCCTGCAAATATGCCTCGTTTTG TTTTAGTCCCTGTAAAAAAAA TTGTTGTTTTTGGTCCCTGCA                                                          
|||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||                                                          C
ATTT AAATCCGATTTTATACCAAAACCAGGGACGTTTATACGGAGCAAAAC AAAATCAGGGACGTTTTTTTT AACAACAAAAACCAGGGACGT                                                          
    G                                               C                     A                     TTATACGGAGTAAAACCAAAACCAGGGACCGAGGTTAAAACACTACTAAACGTGTGCA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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